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10 Best Practices for Managing AP Automation in Microsoft Dynamics 365

Aline Andersson - author of accounts payable automation blog. Aline Andersson

11 Feb

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AP Automation Best Practices for Microsoft Dynamics 365 – SignUp Software
Explore 10 best practices for managing AP automation in Microsoft Dynamics 365. Learn how to optimize workflows, reduce costs, and ensure seamless financial processes.

Importance of Best Practices in AP Automation

Automating your accounts payable (AP) process isn’t just about saving time—it’s about creating a smooth, error-free, and scalable financial system. Adopting best practices in accounts payable automation helps ensure that your organization is not only using technology effectively but also fully leveraging the advanced capabilities of systems like Microsoft Dynamics 365.

Without structure and strategy, even the best AP automation solutions can lead to inefficiencies. Think of AP automation as a high-performance race car. Sure, it’s engineered for speed and precision, but without a skilled driver and a clear track strategy, it won’t reach the finish line ahead of the competition. By implementing the best practices in AP automation, you can keep your workflows efficient, compliant, and adaptable.

AP Automation Best Practices for Microsoft Dynamics 365

Let’s jump right into it: what makes accounts payable automation in Dynamics 365 thrive? These best practices can make a significant difference:

  1. Align AP Automation Goals with Business Objectives
    Your AP automation system should support broader goals like cost reduction, scalability, risk mitigation, and improved vendor relationships.
    Why it matters: Ensures that automation aligns with and drives overall business success.
  2. Standardize Data Inputs
    Use templates or tools to ensure invoices are submitted consistently. It’s like ensuring apples-to-apples comparisons instead of apples-to-oranges.
    Why it matters: Consistency in data entry reduces errors and streamlines downstream processes.
  3. Implement Multi-Level Approvals
    Customize approval hierarchies within Dynamics 365 to avoid bottlenecks while maintaining security.
    Why it matters: Prevents delays and ensures accountability while maintaining secure workflows.
  4. Automate Invoice Matching
    Use invoice matching automation to ensure 3-way matching accuracy between purchase orders, invoices, and receipts.
    Why it matters: Reduces manual intervention, speeds up processing, and minimizes errors.
  5. Prioritize Real-Time Analytics
    Take advantage of AP automation solutions that offer real-time insights, so you can catch issues before they snowball.
    Why it matters: Provides proactive decision-making capabilities and enhances operational visibility.
  6. Leverage AI and Machine Learning
    AI-powered features in Dynamics 365, such as predictive analytics and automated error detection, can improve processing accuracy. For example, systems like ExFlow utilize AI to identify and flag potential discrepancies proactively.
    Why it matters: Enables faster resolutions, smarter resource allocation, and fewer human errors.
  7. Adopt Mobile Approvals
    With mobile-friendly workflows, approvers can authorize invoices from anywhere. This ensures faster cycle times and reduces bottlenecks in remote or hybrid work environments.
    Why it matters: Increases flexibility for teams and ensures workflows remain uninterrupted.
  8. Conduct Regular Process Audits
    Regularly auditing your AP workflows ensures that your automation system is running optimally and aligns with current business needs. Use Dynamics 365’s reporting and analytics features to identify inefficiencies, outdated processes, or bottlenecks.
    Why it matters: Continuous improvement through periodic reviews helps maintain efficiency, compliance, and adaptability as your organization evolves.
  9. Monitor Compliance Regularly
    Leverage compliance tools in Dynamics 365 to ensure adherence to tax regulations and audit standards. Automating compliance tracking minimizes risks and ensures readiness for audits.
    Why it matters: Helps avoid legal risks, ensures adherence to regulations, and simplifies audit preparation.
  10. Plan for Scalability
    Design workflows that can handle increased volumes as your business grows. Scalable systems prevent disruption during expansion and maintain efficiency across global teams.
    Why it matters: Ensures that your AP processes can adapt seamlessly to future growth and operational demands.

Optimizing Invoice Workflows in AP Automation

Efficiency starts with workflow optimization. Microsoft Dynamics 365 provides an array of tools for automating invoice approvals, flagging errors, and routing payments for processing. Here’s how you can level up:

Workflow ElementOptimization Tip
Invoice CaptureLeverage OCR technology to minimize manual entry.
Approval RoutingSet conditional logic for automatic routing to relevant approvers.
Payment SchedulingAutomate payment releases to avoid late fees and missed discounts.

These enhancements not only streamline the process but also ensure compliance. Plus, when invoice matching automation is incorporated, discrepancies get flagged before they become roadblocks.

Boost AP Performance with These Best Practices

Improving AP automation performance starts with measuring the right metrics. Ask yourself:

  • How long does it take to process a single invoice?
  • What percentage of invoices require manual intervention?
  • Are there recurring issues with matching or approval delays?

Key Metrics to Track

  • Invoice cycle time: Aim for processing in under 5 days.
  • Error rates: Keep manual corrections below 2%.
  • Discount utilization: Capture over 95% of early payment discounts.

By regularly evaluating your performance against these benchmarks, you can identify bottlenecks and adapt your AP automation system to meet your organization’s evolving needs.

Key Features in D365 for AP Automation with ExFlow

ExFlow is designed to fully utilize and enhance the native capabilities of Dynamics 365 for AP automation. If you want to go the extra mile, you can add a “bonus best practice” to your AP automation journey:


Bonus ✴ Best Practice #11: Level Up Your ERP with an Embedded AP Automation Solution

For organizations using Microsoft Dynamics 365, choosing an embedded AP automation solution like ExFlow can significantly enhance efficiency and streamline operations. Unlike third-party tools that require external connectors, ExFlow operates natively within Dynamics 365, offering a built-in advantage and real-time data sharing across your ERP.

Why it matters:
With ExFlow, you eliminate the complexity of managing external systems, ensuring smoother workflows, faster implementation, and minimal disruption to your existing processes. Embedded solutions like ExFlow provide the scalability and flexibility needed to handle increasing invoice volumes while maintaining accuracy and compliance.

An embedded solution also enhances user adoption, as your team works within the familiar Dynamics 365 interface, reducing training time and maximizing productivity from day one.

Here’s how ExFlow’s features align with and build upon Dynamics 365’s robust tools:

The Built-in Advantage

ExFlow operates directly within the Dynamics 365 environment, allowing you to level up your ERP with a natively embedded solution. This eliminates the hassle of third-party connectors, enabling real-time data sharing across your ERP. You can manage everything from invoice capture to payment processing without leaving the familiar Dynamics interface.

  • Why this matters: With no external tools to juggle, your processes remain streamlined, and your team avoids unnecessary complexity.

AI-Powered Invoice Scanning

ExFlow takes AI-powered invoice scanning to the next level by automatically extracting, validating, and matching invoice data with purchase orders and receipts in Dynamics 365. This reduces manual data entry and ensures accuracy at every step of the process.

  • Example Use Case: ExFlow’s automated matching capabilities handle both 2-way and 3-way matching seamlessly, flagging any discrepancies for review.
  • Impact: Faster approvals, fewer errors, and more time for strategic tasks.

Customizable Workflows

With ExFlow, you can customize approval workflows to match your organization’s structure and policies. Dynamics 365’s flexibility combined with ExFlow’s advanced automation ensures invoices are routed to the right approvers, regardless of complexity.

  • How it helps: Automating and tailoring approval paths reduces bottlenecks, speeds up invoice processing, and maintains compliance.

AP Analytics Dashboards

ExFlow enhances Dynamics 365’s real-time analytics dashboards by providing deep insights into your AP performance. These dashboards give you visibility into processing times, error rates, and payment schedules.

  • Why it’s essential: Tracking these metrics helps you identify bottlenecks and improve efficiency, while also keeping your organization audit-ready.

Why Choose ExFlow for AP Automation in Dynamics 365?

ExFlow doesn’t just work with Dynamics 365; it works inside it. This natively embedded solution ensures your AP automation processes align perfectly with the Dynamics ecosystem. You’ll avoid the challenges of external integrations while benefiting from a native, scalable solution that grows with your business.

Here’s how ExFlow transforms your AP process:

  • Improved efficiency: Automation reduces invoice cycle times and frees up your team for higher-value tasks.
  • Enhanced accuracy: AI-powered tools ensure invoices are correctly matched and processed.
  • Scalability: ExFlow is designed to handle growing invoice volumes, making it suitable for organizations of any size.

Key Benefits of Utilizing AP Automation Best Practices

When implemented correctly, accounts payable automation solutions deliver benefits that go far beyond time savings:

  • Cost Savings: Automating invoice workflows can reduce processing costs by up to 80%.
  • Error Reduction: Automation minimizes human error in invoice matching and data entry.
  • Scalability: With streamlined processes, your AP team can handle higher volumes without additional headcount.

Here’s a quick comparison of traditional AP vs. automated AP:

AspectManual ProcessAP Automation
Processing Time (from sendout to posting)12–15 days3–5 days
Error RateHighMinimal
ScalabilityLimitedScales with business growth

Building an AP Automation Process

Ready to build your ideal AP automation system in Microsoft Dynamics 365? Follow these steps:

  1. Audit your current AP process
    Identify inefficiencies and common bottlenecks.
  2. Set clear goals
    Whether it’s reducing costs or improving vendor satisfaction, define measurable outcomes.
  3. Customize workflows
    Use the tools in Dynamics 365 to create tailored approval hierarchies and triggers.
  4. Train your team
    A well-informed AP team is your greatest asset. Provide ongoing training on both processes and software.
  5. Monitor and adapt
    Regularly review your AP automation solution for performance and compliance improvements.

In Summary

Implementing these AP automation best practices within Microsoft Dynamics 365, and leveling up your ERP with built-in AP automation solutions like ExFlow is your ticket to smoother financial operations, fewer headaches, and a happier finance team. Whether you’re just starting or looking to optimize an existing system, these best practices will help you stay ahead of the curve.

Ready to revolutionize your AP process? Book a demo for ExFlow and get started today.

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